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Tuesday (May 7)
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Wednesday (May 8)
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Thursday (May 9)
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Friday (May 10)
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chair: Jill Chengzhu Zhang
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chair: Chris Terai
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chair: Wuyin Lin
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chair: Chris Terai
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7:30
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breakfast provided, Shyh Wang Hall
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breakfast and coffee
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breakfast and coffee
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breakfast and coffee
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8:00-8:15
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Check-in + settling in + coffee
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coffee
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coffee
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coffee
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8:15-8:30
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Prerequisites
2024 E3SM Tutorial, Day 1, Lecture Sessions
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8:30-9:15
45 mins
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Video: 00:00:00 – Welcome to Tutorial: Jill Zhang,
View file name Day1_Welcome_logistics.pdf
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Check-in + settling in
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Check-in + settling in
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Check-in + settling in
Video: 00:06:13 – Overview of the E3SM Project: Dave Bader,
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View file name E3SM_Overview_Day_1.pdf Video: 00:30:07 – E3SM as an Open Development Project, Resources and Policies: Renata McCoy,
View file name E3SM_an_Open_Development_Project_Resources_and_Policies__2024_E3SM_Tutorials__Renata_McCoy.pdf
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Video: 00:44:31 – Coupled System Overview: Chris Golaz,
View file name
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20240507_E3SM_Tutorial_
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| View file | ||
|---|---|---|
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Single Column Model (SCM) and Doubly-Periodic (DP) config
Xue Zheng
Coupled.pdf page Copy of Agenda: 2024 E3SM Tutorial Workshop space EPWCD Video: 01:27:45 – E3SM Atmosphere Model (EAM) Overview: Shaocheng Xie and Paul Ullrich,
View file name
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20240507_
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E3SM_
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Tutorial_
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Coupled.pdf
Regionally Refined Model (RRM) - simulations
Qi Tang
| View file | ||
|---|---|---|
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Multi-scale Modeling Framework (MMF)
Walter Hannah
Video: 02:34:56 – E3SM HPC Resources: Noel Keen,
View file name
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e3sm-
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Human Earth System Coupling Part II
(15 min talk + 5 min questions)
Qing Zhu
| View file | ||
|---|---|---|
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Influence of Eastern Pacific hurricanes on the Southwest US wildfire environment
(15 min talk + 5 min questions)
Karthik Balaguru
| View file | ||
|---|---|---|
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9:15-10:00
45 mins
Coupled system overview
Chris Golaz
| View file | ||
|---|---|---|
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Testing and code review
Rob Jacob
See E3SM Code Review and New Feature Process
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tutorial-nersc-resources.pdf
2024 E3SM Tutorial, Day 1, Practicum
Video: 00:00:00 - Intro to the Case Control System, Rob Jacob, https://portal.nersc.gov/project/e3sm/Tutorials/2024/scripts/practice-scripts.html, https://esmci.github.io/cime/versions/master/html/users_guide/
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You may want to have a terminal open to follow along with the testing portion.
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10:00-10:15
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break
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break
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break
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break
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10:15-11:00
45 minutes
Atmosphere modeling
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,
Video: 00:53:13 - Run Script, Chris Golaz, https://portal.nersc.gov/project/e3sm/Tutorials/2024/scripts/
Video: 01:03:55 - Post Processing Tools for Analyzing E3SM Data, Paul Ullrich, Charlie Zender, Tom Vo
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smn_
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nco_
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Land and River modeling
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e3sm_202405.pdf 01:32:02 - E3SM Unified, Xarray, UXarray, and xCDAT, Tom Vo,
View file name
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Tian Zhou
| View file | ||
|---|---|---|
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Jennifer Holm
| View file | ||
|---|---|---|
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SCREAM
Peter Caldwell
| View file | ||
|---|---|---|
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Polar Processes, Sea-Level Rise, and Coastal Impacts overview, including land ice and ice shelf cavity modeling
(15 min talk + 5 min questions)
| View file | ||
|---|---|---|
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Darin Comeau, Alice Barthel
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05-07-24 E3SM Tutorial Workshop - E3SM Post-Processing Tools-2.pdf
Video: 01:46:34 - Submitting Large Jobs, Wuyin Lin, https://portal.nersc.gov/project/e3sm/Tutorials/2024/scripts/#RunOneYear
2024 E3SM Tutorial, Day 2, Lecture Sessions
Video: 00:00:00 – 2024 E3SM Tutorial, Day 2, Lecture Sessions
Video: 00:00:05 – Ocean Modeling, Alice Barthel and Mark Petersen,
View file name
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Ocean_E3SM_
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Tutorial_Barthel_Petersen_240508.pptx
(15 min talk + 5 min questions)
Susannah Burrows
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45 minutes
Human Earth System Coupling Part I
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Video: 00:51:59 – Sea Ice Modeling in E3SM, Darin Comeau,
View file name
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E3SM_
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tutorialSeaice.pptx
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Video: 01:14:19 – E3SM Land Model (ELM) Overview, Dan Ricciuto,
View file name
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Ricciuto_
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ELMtutorial_
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May2024.pptx
The Vertical Grid
of the E3SM Atmosphere
(15 min talk + 5 min questions)
Walter Hannah
Video: 01:48:39 – River Modeling in E3SM, Tian Zhou,
View file name
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Zhou_E3SM
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_MOSART_tutorial
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.
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Machine Learning applications for climate modeling
(15 min talk + 5 min questions)
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pdf Video: 02:15:06 – The Functionally Assembled Terrestrial Ecosystem Simulator (FATES) Tutorial, Jennifer Holm,
View file name
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11:45-13:00
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Group picture before lunch
Lunch break
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Lunch break
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Lunch break
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Lunch break
13:00-13:15
NERSC computational environment and E3SM HPC resources (13:00-13:15pm 15 mins)
Noel Keen
| View file | ||
|---|---|---|
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Practicum: Modifying simulation configurations – options, namelist changes (simulation design, parameter tuning, input, output)
Instructor
Wuyin Lin, Chris Terai,
Mark Petersen, Darin Comeau
Dan Ricciuto
2024 E3SM FATES Tutorial Lecture .pptx
2024 E3SM Tutorial, Day 2, Practicum
Practicum: Breakout sessions:
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Video: 00:00:00 - 2024 E3SM Tutorial Day 2 Practicum Session
Video: 00:00:10 - Modifying Simulation Configurations, Wuyin Lin, Mark Petersen, Daniel Ricciuto, Chris Terai, Darin Comeau , https://portal.nersc.gov/project/e3sm/Tutorials/2024/scripts/practice-scripts.html,
View file name E3SM_practicum_day2_namelist_changes.pptx
Practicum: Standard post-processing workflow(zstash archiving/extraction, zppy diagnostics workflow)
Instructor & TAs
Ryan Forsyth, Chris Golaz
| View file | ||
|---|---|---|
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Video: 00:46:14 - Diagnostics Tools
00:46:27 Diagnostic Packages in E3SM Evaluation, Jill Zhang,
View file name
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E3SM_Diags_fin.pdf 01:00:54 MPAS-Analysis, Alice Barthel,
View file name
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E3SMtutorial_
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MPAS-Analysis.pptx
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01:12:25 E3SM Chemistry Diagnostics - ChemDyg, Hsiang-He Lee,
View file name
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20240508 E3SM tutorial_
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ChemDyg_
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v2.
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continuation of practicum exercises from week
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13:15-13:30
Practicum Intro: Run E3SM (set up simulation+code management, run simulation with CIME and run scripts)+ Provenance
NOTE: This is HANDS ON!. Have 2 terminals open and logged in to Perlmutter. You should have a copy of the E3SM source code.
See intro to the Case Control System.
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pdf 01:22:33 Diagnostic Tools, practicum instructions
E3SM Diagnostics: https://github.com/E3SM-Project/e3sm_diags/blob/main/examples/tutorials2024/E3SM_Diags_Exercise.md
MPAS-Analysis: Day 2- MPAS-Analysis Practicum
Video: 01:24:26 - Submitting Large Jobs, Wuyin Lin
View file name
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Instructor with TAs
Rob Jacob and Chris Golaz
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13:30-14:00
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14:00-14:30
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Practicum (submitting coupled simulation)
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14:30-14:50
20mins
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““ + break
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““+ break
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““ + break
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break
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14:50-15:20
Practicum Intro: Post processing tools for analyzing E3SM data (e3sm_unified, nco, ncvis, xarray/xcdat, uxarray etc)
Instructor with TAs
Paul Ullrich,
Practicum_day2_namelist.pptx
2024 E3SM Tutorial, Day 3, Lecture Sessions
Video: 00:00:00 - 2024 E3SM Tutorial Day 3, Lecture Sessions, Intro, Wuyin Lin
Video: 00:02:27 - Single Column Model (SCM) and Doubly-Periodic (DP) Configuration, Xue Zheng,
View file name bogenschutz_zheng_2024_E3SMtutorial_xz.pdf Video: 00:31:49 - Regionally Refined Model (RRM), Qi Tang,
View file name
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20240509_
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Tang_
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RRM_
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tutorial.f.
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Practicum Intro: Diagnostic tools(E3SM Diags, Mpas-analysis, ChemDyg)
Instructor & TAs
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pptx Video: 01:03:53 - Multi-scale Modeling Framework (MMF), Walter Hannah,
View file name
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Practicum Setup instructions
Go to JupyterHub (Login Node):
https://jupyter.nersc.gov/hub/home
Open up a terminal and clone the repo:
git clone https://github.com/xCDAT/xcdat-validation
Find the notebooks under:
demos/2024-e3sm-workshop/uxarray_practicum_notebook.ipynb
demos/2024-e3sm-workshop/xarray_practicum_notebook.ipynb
2024-05_E3SM-tutorial_MMF.pptx Video: 01:26:04 - Next-Generation Atmosphere Modeling in E3SM, Peter Caldwell,
View file name EAMxx_Overview.pptx Video: 02:08:37 - Human Earth System Coupling, Part I
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GCAM_tutorial_
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may2024.
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pptx 02:38:12 - Marine BGC, Kat Smith,
View file name
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E3SMTutorial_MarineBGC_upload.pptx
2024 E3SM Tutorial, Day 3, Practicum
Video: 00:00:00 - 2024 E3SM Tutorial Day 3 Practicum Session
Video: 00:00:08 - E3SM post-processing, Ryan Forsyth,
View file name
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E3SM
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Post Processing 2024_
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05_
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07.pdf
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Practicum:
Video: 00:37:39 - Modifying the source code
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Instructor & TAs
, Chris Terai
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Wuyin Lin
Mark Petersen
Darin Comeau
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, Mark Petersen, Wuyin Lin, Walter Hannah, Daniel Ricciuto,
View file name E3SM_practicum_day3_code_changes.pptx 00:37:39 - Intro
00:41:32 - git branches
00:43:54 - modifying code, atmosphere model
00:47:47 - submitting simulations
00:54:20 - modifying code, ocean example #1,
View file name Ocean_code_addition_day3_practicaum.pptx 00:59:46 - modifying code, ocean example #2
01:02:58 - modifying code, land example,
View file name Land_code_addition_day3_practicaum.pptx
Video: 01:06:14 - closing remarks,
View file name Day3_afterhours_simulations.pptx
Recap
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15:20-16:20
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Practicum (analyzing existing E3SM output)
Practicum (diagnostic tools – break out with domain specific group)
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Departure
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16:20-16:30
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Self select groups of 4 (or so) for submitting large jobs.
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2024 E3SM Tutorial, Day 4, Lecture Sessions
Video: 00:00:00 - 2024 E3SM Tutorial Day 4, Lecture Sessions, Intro, Chris Terai
Video: 00:02:50 - Human Earth System Coupling Part II, Qing Zhu,
View file name Zhu.pptx Video: 00:24:42 - Influence of Eastern Pacific hurricanes on the Southwest US wildfire environment, Karthik Balaguru,
View file name E3SM-tutorial_May2024.pptx Video: 00:46:43 - E3SM Code Review and New Feature Process & Testing Cases - CIME master docs, Rob Jacob, E3SM Code Review and New Feature Process , https://esmci.github.io/cime/versions/master/html/users_guide/testing.html
Video: 01:32:37 - Polar Processes, Sea-Level Rise, and Coastal Impacts, land ice and ice shelf cavity, Darin Comeau, Alice Barthel,
View file name Polar-highlight-Comeau.pptx Video: 01:58:04 - Aerosols and aerosol forcings in v3, Susannah Burrows,
View file name
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2024_E3SM_
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tutorial_
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Aerosols.pptx
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16:30-16:40
Video: 02:22:49 - The Vertical Grid of the E3SM Atmosphere, Walter Hannah,
View file name
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2024-05_
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E3SM-
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tutorial_QBO.
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Daily debrief + Departure
Daily debrief + Departure
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16:40-17:00
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Guided Tour of NERSC (Group 1)
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Guided Tour of NERSC
(Group 2)
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Evening events
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Conference dinner (6pm at Triple Rock)
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reserve extra rooms:
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14:30 - 17:00
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13:30 - 17:00
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13:30 - 17:00
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13:00 - 17:00
Friday practicum sessions
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Group
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Speaker
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Topic & Availability for Practicum Session
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Practicum breakout: atmosphere
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Atmos
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Walter Hannah
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initial condition creation for hindcast simulations using HICCUP (practicum)
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Practicum breakout: land
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Land
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Dan Ricciuto
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offline testbed for ELM (practicum)
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Practicum breakout: ocean/ice
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Mpas
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Mark Petersen
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pptx Video: 02:43:06 - Machine Learning applications for climate modeling, Peter Caldwell,
View file name ML_in_ClimateModeling2.pptx
2024 E3SM Tutorial, Day 4, Practicum
Video: 00:00:00 - 2024 E3SM Tutorial, Day 4, Practicum Session
Video: 00:00:13 - Atmosphere Breakout - Running Hindcasts with HICCUP, Walter Hannah,
View file name 2024-05_E3SM-tutorial_Practicum.pptx Video: 01:21:34 - Land Breakout - Offline Land Model Testbed (OLMT), Dan Ricciuto,
View file name OLMT_E3SMtutorial.pptx Video: 02:55:22 Ocean & Sea Ice Breakout Mark Petersen, Darin Comeau, Alice Barthel,
View file name Ocean_breakout_Petersen_240510.pptx