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Tuesday (May 7)
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Wednesday (May 8)
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Thursday (May 9)
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Friday (May 10)
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chair: Jill Chengzhu Zhang
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chair: Chris Terai
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chair: Wuyin Lin
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chair: Mark Petersen
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7:30
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breakfast provided, Shyh Wang Hall
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breakfast and coffee
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breakfast and coffee
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breakfast and coffee
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8:00-8:15
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Check-in + settling in + coffee
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coffee
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coffee
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coffee
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8:15-8:30
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Prerequisites
2024 E3SM Tutorial, Day 1, Lecture Sessions
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8:30-9:15
45 mins
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Video: 00:00:00 – Welcome to Tutorial: Jill Zhang,
View file name Day1_Welcome_logistics.pdf
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Check-in + settling in
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Check-in + settling in
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Check-in + settling in
Video: 00:06:13 – Overview of the E3SM Project: Dave Bader,
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View file name E3SM_Overview_Day_1.pdf Video: 00:30:07 – E3SM as an Open Development Project, Resources and Policies: Renata McCoy,
View file name E3SM_an_Open_Development_Project_Resources_and_Policies__2024_E3SM_Tutorials__Renata_McCoy.pdf
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Video: 00:44:31 – Coupled System Overview: Chris Golaz,
View file name
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20240507_E3SM_Tutorial_
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Single Column Model (SCM) and Doubly-Periodic (DP) config
Xue Zheng
Coupled.pdf page Copy of Agenda: 2024 E3SM Tutorial Workshop space EPWCD Video: 01:27:45 – E3SM Atmosphere Model (EAM) Overview: Shaocheng Xie and Paul Ullrich,
View file name
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20240507_
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E3SM_
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Tutorial_
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Coupled.pdf
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Regionally Refined Model (RRM) - simulations
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Video: 02:34:56 – E3SM HPC Resources: Noel Keen,
View file name
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Multi-scale Modeling Framework (MMF)
Walter Hannah
| View file | ||
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Human Earth System Coupling Part II
(15 min talk + 5 min questions)
Qing Zhu
| View file | ||
|---|---|---|
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Influence of Eastern Pacific hurricanes on the Southwest US wildfire environment
(15 min talk + 5 min questions)
e3sm-tutorial-nersc-resources.pdf
2024 E3SM Tutorial, Day 1, Practicum
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Video: 00:00:00 - Intro to the Case Control System, Rob Jacob, https://portal.nersc.gov/project/e3sm/Tutorials/2024/scripts/practice-scripts.html, https://esmci.github.io/cime/versions/master/html/users_guide/introduction-and-overview.html,
Video: 00:53:13 - Run Script, Chris Golaz, https://portal.nersc.gov/project/e3sm/Tutorials/2024/scripts/
Video: 01:03:55 - Post Processing Tools for Analyzing E3SM Data, Paul Ullrich, Charlie Zender, Tom Vo
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9:15-10:00
45 mins
smn_nco_e3sm_202405.pdf 01:32:02 - E3SM Unified, Xarray, UXarray, and xCDAT, Tom Vo,
View file name
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Testing and code review
Rob Jacob
See E3SM Code Review and New Feature Process
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05-07-24 E3SM Tutorial Workshop - E3SM Post-Processing Tools-2.pdf
Video: 01:46:34 - Submitting Large Jobs, Wuyin Lin, https://
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10:00-10:15
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break
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break
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break
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break
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10:15-11:00
45 minutes
Atmosphere modeling
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2024 E3SM Tutorial, Day 2, Lecture Sessions
Video: 00:00:00 – 2024 E3SM Tutorial, Day 2, Lecture Sessions
Video: 00:00:05 – Ocean Modeling, Alice Barthel and Mark Petersen,
View file name Ocean_E3SM_Tutorial_Barthel_Petersen_240508.pptx Video: 00:51:59 – Sea Ice Modeling in E3SM, Darin Comeau,
View file name
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E3SM_
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tutorialSeaice.pptx
Land and River modeling
Video: 01:14:19 – E3SM Land Model (ELM) Overview, Dan Ricciuto,
View file name Ricciuto_ELMtutorial_May2024.pptx Video: 01:48:39 – River Modeling in E3SM, Tian Zhou,
View file name Zhou_E3SM_MOSART_tutorial.pdf Video: 02:15:06 – The Functionally Assembled Terrestrial Ecosystem Simulator (FATES) Tutorial, Jennifer Holm,
View file name 2024 E3SM FATES Tutorial Lecture .pptx
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SCREAM
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2024 E3SM Tutorial, Day 2, Practicum
Video: 00:00:00 - 2024 E3SM Tutorial Day 2 Practicum Session
Video: 00:00:10 - Modifying Simulation Configurations, Wuyin Lin, Mark Petersen, Daniel Ricciuto, Chris Terai, Darin Comeau , https://portal.nersc.gov/project/e3sm/Tutorials/2024/scripts/practice-scripts.html,
View file name
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Polar Processes, Sea-Level Rise, and Coastal Impacts overview, including land ice and ice shelf cavity modeling
(15 min talk + 5 min questions)
| View file | ||
|---|---|---|
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Darin Comeau, Alice Barthel
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E3SM_practicum_day2_namelist_changes.pptx Video: 00:46:14 - Diagnostics Tools
00:46:27 Diagnostic Packages in E3SM Evaluation, Jill Zhang,
View file name
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E3SM_
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Diags_
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fin.
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(15 min talk + 5 min questions)
Susannah Burrows
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11:00-11:45
45 minutes
Human Earth System Coupling Part I
Alan Di Vittorio
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pdf 01:00:54 MPAS-Analysis, Alice Barthel,
View file name
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E3SMtutorial_MPAS-Analysis.pptx 01:12:25 E3SM Chemistry Diagnostics - ChemDyg, Hsiang-He Lee,
View file name
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20240508 E3SM tutorial_
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ChemDyg_
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v2.
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The Vertical Grid
of the E3SM Atmosphere
(15 min talk + 5 min questions)
Walter Hannah
| View file | ||
|---|---|---|
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Machine Learning applications for climate modeling
(15 min talk + 5 min questions)
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pdf 01:22:33 Diagnostic Tools, practicum instructions
E3SM Diagnostics: https://github.com/E3SM-Project/e3sm_diags/blob/main/examples/tutorials2024/E3SM_Diags_Exercise.md
MPAS-Analysis: Day 2- MPAS-Analysis Practicum
Video: 01:24:26 - Submitting Large Jobs, Wuyin Lin
View file name
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Practicum_
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day2_
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namelist.pptx
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11:45-13:00
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Group picture before lunch
Lunch break
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Lunch break
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Lunch break
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Lunch break
13:00-13:15
NERSC computational environment and E3SM HPC resources (13:00-13:15pm 15 mins)
Noel Keen
| View file | ||
|---|---|---|
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Practicum: Modifying simulation configurations – options, namelist changes (simulation design, parameter tuning, input, output)
Instructor
Wuyin Lin, Chris Terai,
Mark Petersen, Darin Comeau
Dan Ricciuto
2024 E3SM Tutorial, Day 3, Lecture Sessions
Video: 00:00:00 - 2024 E3SM Tutorial Day 3, Lecture Sessions, Intro, Wuyin Lin
Video: 00:02:27 - Single Column Model (SCM) and Doubly-Periodic (DP) Configuration, Xue Zheng,
View file name
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bogenschutz_
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zheng_
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2024_
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E3SMtutorial_
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xz.
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Practicum: Standard post-processing workflow(zstash archiving/extraction, zppy diagnostics workflow)
Instructor & TAs
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pdf Video: 00:31:49 - Regionally Refined Model (RRM), Qi Tang,
View file name
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Practicum: Breakout sessions:
atmosphere(lead: Walter Hannah)
land (lead: Dan Ricciuto)
ocean/ice (lead: Mark Petersen)
continuation of practicum exercises from week
20240509_Tang_RRM_tutorial.f.pptx Video: 01:03:53 - Multi-scale Modeling Framework (MMF), Walter Hannah,
View file name 2024-05_E3SM-tutorial_
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MMF.pptx
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Video:
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Practicum Intro: Run E3SM (set up simulation+code management, run simulation with CIME and run scripts)+ Provenance
NOTE: This is HANDS ON!. Have 2 terminals open and logged in to Perlmutter. You should have a copy of the E3SM source code.
See intro to the Case Control System.
01:26:04 - Next-Generation Atmosphere Modeling in E3SM, Peter Caldwell,
View file name
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EAMxx_Overview.
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Instructor with TAs
Rob Jacob and Chris Golaz
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13:30-14:00
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14:00-14:30
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Practicum (submitting coupled simulation)
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14:30-14:50
20mins
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““ + break
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““+ break
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““ + break
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break
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14:50-15:20
Practicum Intro: Post processing tools for analyzing E3SM data (e3sm_unified, nco, ncvis, xarray/xcdat, uxarray etc)
Instructor with TAs
Paul Ullrich,
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pptx Video: 02:08:37 - Human Earth System Coupling, Part I
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DiVittorio_E3SM_
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GCAM_
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tutorial_
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may2024.
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pptx 02:38:12 - Marine BGC, Kat Smith,
View file name
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Practicum Setup instructions
Go to JupyterHub (Login Node):
https://jupyter.nersc.gov/hub/home
Open up a terminal and clone the repo:
git clone https://github.com/xCDAT/xcdat-validation
Find the notebooks under:
demos/2024-e3sm-workshop/uxarray_practicum_notebook.ipynb
demos/2024-e3sm-workshop/xarray_practicum_notebook.ipynb
Practicum Intro: Diagnostic tools(E3SM Diags, Mpas-analysis, ChemDyg)
Instructor & TAs
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E3SMTutorial_MarineBGC_upload.pptx
2024 E3SM Tutorial, Day 3, Practicum
Video: 00:00:00 - 2024 E3SM Tutorial Day 3 Practicum Session
Video: 00:00:08 - E3SM post-processing, Ryan Forsyth,
View file name E3SM Post Processing 2024_
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05_
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Practicum:
Modifying the source code (revisit Git)
Instructor & TAs
Chris Terai
Wuyin Lin
Mark Petersen
Darin Comeau
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07.pdf
Alice Barthel,
| View file | ||
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Hsiang-he Lee
| View file | ||
|---|---|---|
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Video: 00:37:39 - Modifying the source code, Chris Terai, Mark Petersen, Wuyin Lin, Walter Hannah, Daniel Ricciuto,
View file name E3SM_practicum_day3_code_changes.pptx 00:37:39 - Intro
00:41:32 - git branches
00:43:54 - modifying code, atmosphere model
00:47:47 - submitting simulations
00:54:20 - modifying code, ocean example #1,
View file name Ocean_code_addition_day3_practicaum.pptx 00:59:46 - modifying code, ocean example #2
01:02:58 - modifying code, land example,
View file name Land_code_addition_day3_practicaum.pptx
Video: 01:06:14 - closing remarks,
View file name Day3_afterhours_simulations.pptx
Recap
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15:20-16:20
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Practicum (analyzing existing E3SM output)
Practicum (diagnostic tools – break out with domain specific group)
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Departure
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16:20-16:30
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Self select groups of 4 (or so) for submitting large jobs.
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2024 E3SM Tutorial, Day 4, Lecture Sessions
Video: 00:00:00 - 2024 E3SM Tutorial Day 4, Lecture Sessions, Intro, Chris Terai
Video: 00:02:50 - Human Earth System Coupling Part II, Qing Zhu,
View file name Zhu.pptx Video: 00:24:42 - Influence of Eastern Pacific hurricanes on the Southwest US wildfire environment, Karthik Balaguru,
View file name E3SM-tutorial_May2024.pptx Video: 00:46:43 - E3SM Code Review and New Feature Process & Testing Cases - CIME master docs, Rob Jacob, E3SM Code Review and New Feature Process , https://esmci.github.io/cime/versions/master/html/users_guide/testing.html
Video: 01:32:37 - Polar Processes, Sea-Level Rise, and Coastal Impacts, land ice and ice shelf cavity, Darin Comeau, Alice Barthel,
View file name Polar-highlight-Comeau.pptx Video: 01:58:04 - Aerosols and aerosol forcings in v3, Susannah Burrows,
View file name
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2024_E3SM_
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tutorial_
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Aerosols.pptx
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16:30-16:40
Video: 02:22:49 - The Vertical Grid of the E3SM Atmosphere, Walter Hannah,
View file name
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2024-05_
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E3SM-
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tutorial_QBO.
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Daily debrief + Departure
Daily debrief + Departure
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16:40-17:00
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Guided Tour of NERSC (Group 1)
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Guided Tour of NERSC
(Group 2)
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Evening events
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Conference dinner (6pm at Triple Rock)
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reserve extra rooms:
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14:30 - 17:00
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13:30 - 17:00
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13:30 - 17:00
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13:00 - 17:00
Friday practicum sessions
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Group
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Speaker
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Topic & Availability for Practicum Session
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Practicum breakout: atmosphere
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Atmos
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Walter Hannah
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initial condition creation for hindcast simulations using HICCUP (practicum)
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Practicum breakout: land
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Land
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Dan Ricciuto
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offline testbed for ELM (practicum)
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Practicum breakout: ocean/ice
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Mpas
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Mark Petersen
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pptx Video: 02:43:06 - Machine Learning applications for climate modeling, Peter Caldwell,
View file name ML_in_ClimateModeling2.pptx
2024 E3SM Tutorial, Day 4, Practicum
Video: 00:00:00 - 2024 E3SM Tutorial, Day 4, Practicum Session
Video: 00:00:13 - Atmosphere Breakout - Running Hindcasts with HICCUP, Walter Hannah,
View file name 2024-05_E3SM-tutorial_Practicum.pptx Video: 01:21:34 - Land Breakout - Offline Land Model Testbed (OLMT), Dan Ricciuto,
View file name OLMT_E3SMtutorial.pptx Video: 02:55:22 Ocean & Sea Ice Breakout Mark Petersen, Darin Comeau, Alice Barthel,
View file name Ocean_breakout_Petersen_240510.pptx