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To install your own version of the metapackage (typically on a machine not supported by E3SM), install mambaforge miniforge3, typically for Linux and x86_64, then run the following:
| Code Block | ||
|---|---|---|
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mambaconda create -n e3sm-unified -c conda-forge -c e3sm e3sm-unified python=3.10 |
If you plan to use MPI from conda-forge, you will want to use the mpich or openmpi builds of e3sm-unified. For example, for mpich:
| Code Block | ||
|---|---|---|
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mambaconda create -n e3sm-unified-mpich -c conda-forge -c e3sm "e3sm-unified=*=mpi_mpich_*" python=3.10 |
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For previous versions see: Packages in previous versions E3SM Unified conda environment
Current Version
e3sm-unified 1.9.
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3
Release candidate testing start date: |
| ||
Release date: | ||
Unknown | |||
Main Packages | |||
package | version | maintainer(s) | Notes |
|---|---|---|---|
python | >=3.9,<3.11 | Default python version (used for supported machines) will be 3.10 | |
chemdyg | 0.1.5 | ||
e3sm_diags | 2. | ||
11. |
0 |
- need one more PR (to be issued soon) – Naser Mahfouz
cdp is no longer a dependency, output_viewer is now a dependency (replaces cdp)e3sm_to_cmip | 1.11. |
chemdyg
0.1.4
2 |
CDAT is no longer a dependency (cdms2, cdutil) and xcdat>=0.6.0 is now a dependency.
Includes an Xarray I/O fix for zppy | |
geometric_features | 1. |
3.0 | |||
globus-cli | nospec | ||
ilamb | 2.7 | With system MPI on compute nodes |
ipython | nospec | ||
jupyter | nospec | ||
livvkit | 3.0.1 | ||
mache | 1. |
21.0 | |||
moab | 5.5.1 | With system MPI on compute nodes | |
mpas-analysis | 1. |
10. |
0 |
Not yet released - fixes a bug in stats on climatology maps
mpas_tools | 0. |
32.0 | ||
nco | 5. |
2. |
2 | With system MPI on compute nodes | ||
pcmdi_metrics | 2.3.1 | ||
tempest-remap | 2.2.0 | With system compilers on compute nodes | |
tempest-extremes | 2.2.1 | With system MPI on compute nodes | |
xcdat | 0.6.1 |
0.6.0 includes vertical regridding with xgcm as a new dependency and 0.6.1 makes xesmf a required dependency
zstash | 1.4.2 |
Not yet released - redirects help text to stderr to make output parsing easier, updates default LCRC Globus endpoints.
zppy | 2.4.0 | ||
mkdoc dependencies | |||
package | version | maintainer(s) | |
mkdocs-material | nospec | ||
pymdown-extensions | nospec | ||
mkdocs-monorepo-plugin | nospec | ||
mdutils | nospec | ||
mkdocs-bibtex | nospec | ||
Dependencies | |||
package | version | maintainer(s) | |
|---|---|---|---|
blas | nospec | ||
bottleneck | nospec | ||
cartopy | >=0.17.0 | ||
cdat_info | 8.2.1 | ||
cdms2 | 3.1.5 | ||
cdtime | 3.1.4 | ||
cdutil | 8.2.1 | ||
cmocean | nospec | ||
dask | 2023.6.0 | ||
dogpile.cache | nospec | ||
eofs | nospec | ||
esmf | 8. | ||
6. |
0 | With system MPI on compute nodes | ||
esmpy | 8.6.0 | ||
f90nml | nospec | ||
ffmpeg | nospec | ||
genutil | 8.2.1 | ||
globus-sdk | nospec | ||
gsw | nospec | ||
hdf5 | 1.14.3 | ||
ipygany | nospec | ||
libnetcdf | 4.9.2 | ||
lxml | nospec | ||
matplotlib | 3. |
8. |
2 |
We are having trouble with 3.8.1 (the latest):
metpy | nospec | ||
mpi4py | nospec | With system MPI on compute nodes | |
nb_conda | nospec | ||
ncview | 2.1.8 | ||
ncvis | 2023.09.12 |
Naser Mahfouz recently updated ncvis to all releases it has on the source repo. Change from nospec to the latest 2023.09.12 release
netCDF4 | 1.6.4 nompi | ||
numpy | >1.13 | ||
output_viewer | 1.3.1 | ||
pillow | nospec | ||
plotly | nospec | ||
progessbar2 | nospec | ||
proj | 9.3.1 | ||
pyproj | 3.6.1 | ||
scikit-image | nospec | ||
scipy | nospec | ||
pyevtk | nospec | ||
pyflann | nospec | ||
pyremap | nospec | ||
pytest | nospec | ||
pywavelets | nospec | ||
shapely | nospec | ||
sympy | nospec | ||
tabulate | nospec | ||
xarray | 2023.5.0 | ||
xesmf | nospec |
Next versions
To request changes to package versions, please change the version below and mark them in bold.
...
Use "nospec" for packages where conda should automatically choose the version (typically the latest).
e3sm-unified 1.
...
10.
...
0
Release candidate testing start date: |
| ||
Release date: | ||
| We are pushing this up so it can include new features needed for the E3SM tutorial | ||
Main Packages | |||
package | version | maintainer(s) | Notes |
|---|---|---|---|
python | >=3.9,<3.11 | Default python version (used for supported machines) will be 3.10 | |
R | no spec | ||
chemdyg | 1.0.1 | ||
e3sm_diags | 2. | ||
chemdyg
0.1.5
12.0 not released yet | ||
e3sm_to_cmip | 1.11.2 |
Includes an Xarray I/O fix for zppy
e3sm-tools | 3.0.0 | A set of tools used to integrate new meshes into E3SM:
| |
geometric_features | 1.3.0 | ||
globus-cli | nospec | ||
ilamb | 2.7 | With system MPI on compute nodes | |
ipython | nospec | ||
jupyter | nospec | ||
livvkit | 3.0.1 | ||
mache | 1. |
21.0 | |||
moab | 5.5.1 | With system MPI on compute nodes | |
mpas-analysis | 1. |
11.0 | ||
mpas_tools | 0. |
33.0 | ||
nco | 5.2. |
4 | With system MPI on compute nodes | ||
pcmdi_metrics | 2.3.1 | ||
tempest-remap | 2.2.0 | With system compilers on compute nodes | |
tempest-extremes | 2.2.1 | With system MPI on compute nodes | |
uxarray | >=2024.04.0 | Xarray-styled package for reading and directly operating on unstructured grid datasets https://github.com/UXARRAY/uxarray Note: holoview visualization library is one of uxarray’s dependencies | |
xcdat | 0. |
7. |
0 | ||
zstash | 1.4. |
3 | ||
zppy | 2. |
5.0 not released yet | |||
mkdoc dependencies | |||
package | version | maintainer(s) | |
mkdocs-material | nospec | ||
pymdown-extensions | nospec | ||
mkdocs-monorepo-plugin | nospec | ||
mdutils | nospec | ||
mkdocs-bibtex | nospec | ||
mkdocs-redirects | nospec | ||
markdownlint-cli2 | nospec | ||
Dependencies | |||
package | version | maintainer(s) | |
blas | nospec | ||
bottleneck | nospec | ||
cartopy | >=0.17.0 | ||
cdat_info | 8.2.1 | ||
cdms2 | 3.1.5 | ||
cdtime | 3.1.4 | ||
cdutil | 8.2.1 | ||
cmocean | nospec | ||
dask | 2023.6.0 | ||
dogpile.cache | nospec | ||
eofs | nospec | ||
esmf | 8.6.0 | With system MPI on compute nodes | |
esmpy | 8.6.0 | ||
f90nml | nospec | ||
ffmpeg | nospec | ||
genutil | 8.2.1 | ||
globus-sdk | nospec | ||
gsw | nospec | ||
hdf5 | 1.14.3 | ||
ipygany | nospec | ||
libnetcdf | 4.9.2 | ||
lxml | nospec | ||
matplotlib | |||
3.8.2 | |||
metpy | nospec | ||
mpi4py | nospec | With system MPI on compute nodes | |
nb_conda | nospec | ||
ncview | 2.1.8 | ||
ncvis | 2023.09.12 | ||
nc-time-axis | nospec | Nifty package to correctly plot the time axis with xarray | |
netCDF4 | 1.6.4 nompi | ||
numpy | >1.13 | ||
output_viewer | 1.3.1 | ||
pillow | nospec | ||
plotly | nospec | ||
progessbar2 | nospec | ||
proj | 9.3.1 | ||
pyproj | 3.6.1 | ||
scikit-image | nospec | ||
scipy | nospec | ||
pyevtk | nospec | ||
pyflann | nospec | ||
pyremap | nospec | ||
pytest | nospec | ||
pywavelets | nospec |
shapely
nospec
sympy
nospec
Release candidate testing start date: |
| Release date: |
|
Main Packages | |||
|---|---|---|---|
package | version | maintainer(s) | Notes |
python | >=3.9,<3.11 | Default python version (used for supported machines) will be 3.10 | e3sm_diags | 2.10.1 | e3sm_to_cmip | 1.11.1 | chemdyg | 0.1.5 | geometric_features | 1.2.0 | globus-cli | nospec |
ilamb | 2.7 | With system MPI on compute nodes | |
r-tidyverse | nospec | ||
xarray
2023.5.0
xesmf
nospec
e3sm-unified 1.10.0
ipythonSinha, Eva | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
r-dplyr | 1.0.10 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
r-ggplot2 | nospec | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
shapely | nospec | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
jupytersympy | nospec | livvkit | 3.0.1 | mache | 1.18.0 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
moab | 5.5.1 | With system MPI on compute nodes | mpas-analysis | 1.9.1 | mpas_tools | 0.30.0 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
nco | 5.1.9 | With system MPI on compute nodes | pcmdi_metrics | 2.3.1 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
tempest-remap | 2.2.0 | With system compilers on compute nodes | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
tempest-extremes | 2.2.2 | With system MPI on compute nodes | xcdat | 0.6.1 | zstash | 1.4.2 | zppy | 2.4.0 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Dependencies | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
package | version | maintainer(s) | blas | tabulate | nospec | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
bottleneckwindpharm | nospec | cartopy | >=0.17.0 | cdat_info | 8.2.1 | cdms2 | 3.1.5 | cdtime | 3.1.4 | cdutil | 8.2.1 | cmocean | nospec | dask | 2023.6.0 | dogpile.cache | nospec | eofs | nospec | |||||||||||||||||||||||||||||||||||||||||||
esmf | 8.4.2 | With system MPI on compute nodes | f90nml | nospec | ffmpeg | nospec | genutil | 8.2.1 | globus-sdk | nospec | gsw | nospec | hdf5 | 1.14.3 | ipygany | nospec | libnetcdf | 4.9.2 | lxml | nospec | matplotlib | nospec | metpy | nospec | ||||||||||||||||||||||||||||||||||||||
mpi4py | nospec | With system MPI on compute nodes | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
nb_conda | nospec | ncview | 2.1.8 | ncvis | 2023.09.12 | netCDF4 | 1.6.4 nompi | numpy | >1.13 | output_viewer | 1.3.1 | pillow | nospec | plotly | nospec | progessbar2 | nospec | proj | 9.3.1 | pyproj | 3.6.1 | scikit-image | nospec | scipy | nospec | pyevtk | nospec | pyflann | nospec | pyremap | nospec | pytest | nospec | pywavelets | nospec | shapely | nospec | sympy | nospec | tabulate | nospec | Xylar Asay-Davishttps://pypi.org/project/windspharm/ spherical harmonic vector wind analysis in Python | ||||||||||||||||||||
xarray | 2023.5.0 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
xesmf | nospec | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
...