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Input/output (IO) can also have a big impact on model performance.  So as to not confuse I/O performance with model performance, the usual steps are:

  1. Get a working PIO settings, so that the model will not crash while reading input settings.   Often the default settings will not work, especialy on vary large or very small processor counts.  
  2. Disable history output and restart files for all components.  Then you can use short (5-10 days) simulations to determine an optional processor layout.   Otherwise, short simulations will be dominated by I/O costs and will give misleading performance numbers.    Input and initialization times are not included in SYPD computations. 
  3. Once you have a reasonable processor layout without I/O, use 1 month simulations to test PIO settings.  

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