...
export LIB_NETCDF=/opt/cray/pe/netcdf/4.4.1.01.3/intelINTEL/1516.0/lib
export INC_NETCDF=/opt/cray/pe/netcdf/4.4.1.1.03/intelINTEL/1516.0/include
export USER_FC=ifort
export USER_CC=icc
export USER_LDFLAGS="-L/opt/cray/pe/netcdfhdf5/41.410.0.3/intelINTEL/1516.0/lib -lnetcdf -lnetcdff -lnetcdf_intel"
export USER_LDFLAGS=$USER_LDFLAGS" -L//opt/cray/pe/hdf5/1.10.80.163/intelINTEL/1516.0/lib -lhdf5 -lhdf5_fortran -lhdf5_cpp -lhdf5_fortran_intel -lhdf5_hl_intel -lhdf5hl_fortran_intel"
cd $SCRATCH/ACME/components/clm/tools/clm4_5/mksurfdata_map/src/
...